Sentence examples similar to a revised alignment and from inspiring English sources

The repeat sequences were extracted from the revised alignment of joined clones following the positions of the Miropeat's output and checked for their nucleotide identity using sim2 [ 42] and Blast 2.0 [ 43, 44].

LCRs were identified by application of the Miropeats program [ 41] to the revised alignment.

The clones were identified by Blast of the revised alignment consensus to the chimpanzee BAC end sequence database [ 47].

For suspicious alignments (which had low percent identities or many gaps), we removed problematic sequences and reran PAML on these revised alignments.

We checked the CDS alignments and removed very short gene sequences that could bias the analysis, and re-ran PAML on these revised alignments.

So we're presenting a revised and updated version.

I have included some of the reviewers' minor comments that you may wish to address in a revised version. 1) In Figure 2, an alignment of a 13-residue section from various Fam20A and Fam20C kinases is shown.

Not a revised Islam.

Because Ortho-MCL results may be susceptible to the choice of the inflation parameter, which controls the OG size, and to the accuracy of the alignments; we manually revised the alignments of all gene families and constructed phylogenetic trees to assess whether the genes in each OG could be considered true orthologs.

That was a kind of alignment-and favoritism-too.

In comparison to its actual representation, our revised clone alignment clearly better represents the 8p23.1 complexity and improves the human reference sequence as an invaluable resource for the investigation of individual genetic variations.