Sentence examples for a related reference from inspiring English sources

A related reference (spiking neurons with partial reset) is [38].

In a first step, similar regions between the contigs and a related reference genome have to be determined.

A similar approach was also shown to be successful in assembling several variant strains of Arabidopsis thaliana from a related reference genome [ 9].

More recently, next-generation sequencers such as Illumina, known for being high-throughput and cost-effective, have been used to assemble genomes based on a related reference genome.

Results: Here, we map short metagenomic sequencing reads from a population of strains to a related reference genome, and compose a genome that captures the consensus of the population's sequences.

Comparable subsets of transcriptomic sequences comprising reliable sequence information for alignments on amino acid and RNA level were generated based on the BLAST results, covering 40 to 60% of functions seen in a related reference genome.

Combining both de novo assembly and alignment-based approaches presents a powerful alternative when a closely related reference genome sequence is available, but its genetic differences relative to the target genome are too pronounced to resolve them with an alignment approach alone (Phillippy et al., 2008; Schatz et al., 2013; Schneeberger et al., 2011).

Finally, our analysis illustrates a useful approach that draws from a closely related reference genome to generate high-confidence ESTs in a non-model organism.

Imputation has been shown to increase power in association mapping studies (Marchini et al. 2007; Marchini and Howie 2010) and, for GS, imputation can enable the use of low-density genotyping without a major loss in accuracy because a closely related reference panel genotyped at high density can be used to impute markers not present in the low-density marker panel.

For ALLPATH-LG in its cheat mode, we reassembled the contigs ourselves because this assembler exhibits a better sensitivity and precision performance when providing a closely related reference genome.

Our assembly of a high-quality, conservative transcriptome for Ae. albopictus oocytes highlights useful approaches to utilizing a closely related reference genome to generating high-confidence ESTs in a non-model organism.