Sentence examples for a previous alignment from inspiring English sources

The main advantage of the Cα torsion angle criterion is that it does not depend on a previous alignment of the structures, and that the direction of the change is also defined.

Rhodopsin alignments were performed using a previous alignment as reference [ 20] to remove hyper-variable loops and other unaligned regions.

Another advantage of our approach is that it is not dependent on any previous alignment of homologous regions conserved for many species, which might introduce a bias toward more conserved loci resulting in a reduced sample size.

In all previous alignment-free statistics the k-mers are counted such that each occurrence contributed as 1 irrespective of its quality.

Thereafter, MEF2 coding sequences were aligned according to the previous alignment of MEF2 protein sequences by ClustalW as implemented in MEGA4 [78].

Lastly, a previous sequence alignment identified Asp 820 as a conserved aspartic acid as the surrounding motif was conserved (motif 2, F/YDG conserved in most mammalian PP2Cs).

Constrained by the topography of the site, the route of the Eastern Railway tracks, and the previous alignment of Great Eastern Highway, the bridge has a unique curved and sloping design.

The hairpin (precursor) sequences of the cattle miRNAs with mature sequences that showed no more than two mismatches in the previous alignment step were then selected for a second round of alignments against the 57 vertebrate genomes.

In previous alignment projects, it has been shown that a qvalue threshold at 0.4 will yield precision rates for candidate term pairs of more than 90percentnt [ 6, 13].

Briefly, the two longest sequences are first aligned, and shorter sequences are progressively added onto the previous alignment.

The RIsearch recursion is given as Entries in the M-state (ungapped) can come from (i) the M-state by extending the previous alignment with one residue on both strands, meaning either a stacking of a new pair, or the symmetric extension of an interior loop (or opening, closing an interior loop).