Sentence examples for a phylogeny that includes from inspiring English sources
All the analyses were based on a phylogeny that includes representative species of laurasiatherian mammals.
However, a phylogeny that includes more homologs does not support this hypothesis (Additional file 3).
We are continuing to add taxa to this base tree using the methods described herein with an ultimate goal of generating a phylogeny that includes at least 200 species selected to represent key nodes within the family.
The top BLAST matches were incorporated into a phylogeny that included experimentally characterized enzymes representing both PTase sub-classes [ 20] (data not shown).
Using a phylogeny that included 29 isolates from a previous study (Rosenblum et al. 2013), we found that the two JEL427 isolates clustered together with high bootstrap support and nested within the most recently derived and widely distributed clade, the Global Panzootic Lineage GPLL; Figure 1).
With that limitation in mind, we nonetheless generated a phylogeny that included those sequences along with all the other chicken, zebra finch, and white-throated sparrow TAS2Rs to further elucidate the timing and patterns of gene duplications and losses in this TAS2R gene cluster (fig. 4).
We produce a partial phylogeny that includes nine of the sixty-five species of Pemphigus that have been described [ 2].
Resolution of these issues requires a robust phylogeny that includes representatives from most of the nematoceran infraorders.
This same incongruence was observed in a multigene phylogeny that includes nine genes from the chloroplast, mitochondrial and nuclear genomes [ 40].
Our study addresses the lack of a recent pinniped phylogeny that includes all species and robust divergence dates for all nodes, and will therefore prove indispensable to comparative and macroevolutionary studies of this group of carnivores.
So far, a comprehensive evaluation of morphological, ecological and behavioral diversity in the ovenbird-woodcreeper clade has been hampered by the lack both of a well-supported phylogeny that includes all major lineages, and reasonable age estimates of the divergences within this clade.
