Sentence examples for a pathway layout from inspiring English sources
If a pathway layout is not found, the user may select an automated layout feature patterned after that for JDesigner [ 26], or the user may manually select nodes from a list and paste them on the drawing surface one at a time.
Additionally, SBML does not store the pathway layout in a standard fashion: the different tools that manipulate SBML either generate automatic layouts or use additional storage or definitions to store these information.
When saving an SBML model, the LIPID MAPS pathway layout is contained within the model as an annotation.
Pathway layout is relatively trivial for small diagrams, but a long time has had to be spent on optimizing the layout all of our large pathways so that they are relatively easy to interpret.
The KEGG Atlas was selected for several reasons: (1) a global integrated map is provided; (2) it is a part of one of the most popular pathway databases [26], [12], [27]; and (3) the reference pathway layout can be utilized for the representation of pathways in a wide variety of organisms.
Furthermore, ChiBE provides key technologies including BioPAX input and output, full support for visualizing compound structures such as molecular complexes and cellular locations in SBGN, and customized pathway layout to present this information to the user in an intuitive manner.
Observation outcomes showed pathway layout encourages behaviour, use and time spent in sensory areas.
Pathway layout has been optimized manually in order to provide more clarity to the diagram.
Model network or pathway layout is important for helping users locate species and reactions.
KGML allows the coloring of the genes of the pathway through the supplied graphical representation: changes in interactions and/or in the pathway layout are not supported.
Due to the nature of pathway construction edges are often moved, deleted then redrawn to optimise the pathway layout and for this reason annotation may also be linked to an appropriate process and/or edge annotation node.
