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They found that the elastic network model for the open form generally had a normal mode in which the atomic displacements were close to those in the conformational change, whereas that for the closed form did not.
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It is shown that the time behaviour can be found by assuming a normal mode expansion in tems of the eigenfunctions of the associated elastic shallow shell problem and the deflection is obtained with the aid of the correspondence principle.
The amino-terminal region of the peptide-binding site of HLA-DR1 was previously suggested to be more flexible upon peptide-removal in a normal mode analysis [33] as well as in another molecular dynamics calculation [34].
Regardless, this should be cake in Team Rumble and not all that hard in a normal mode, either.
Vibrational motion in a normal mode might simply involve the stretching of one chemical bond, or can involve all the atoms in a molecule.
We perform a mixed coarse-graining approach in a normal mode analysis of protein motions, which enables the modeling of a protein's native conformation with different regions having low and high resolution.
Therefore a normal mode can be expressed uniquely in terms of the deformed surface.
We have used the class 4 microSD card throughout the work, which means, the card supports 4 MB/s writing speed for video recording in a normal mode.
In side channel analysis, an attacker utilizes some legitimate function queries in order to collect the corresponding responses of a cryptographic system while it is functioning in a normal mode.
Step 5: perform adaptive search range ME determination: for the treeblocks in a simple mode region, the search range window is reconfigured with [SR/8 × SR/8]; for the treeblock in a normal mode region, the search range window is with [SR/4 × SR/4]; otherwise, the search range window is unchanged.
If atoms in a protein are moved by a small amount from the initial positions along the displacement vectors in a normal mode, a slightly different new structure is generated.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com