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A minimal overlap of pY sites from Kc cell proteome data is seen with respect to tyrosine phosphorylation [11].
Since a minimal overlap of 3 residues was used in most studies, in this study, we report the results with a minimal overlap of 3 residues.
Common and sample specific peaks were identified using bedtools [7], with a minimal overlap of one base pair.
Contigs were assembled automatically using Sequencer™ using a minimal overlap of 17 nucleotides and a minimal identity of 85% and refined and corrected manually.
CAP3 (Huang and Madan 1999) was used to assemble sequences at 98%% sequence identity using a minimal overlap of 75 bp.
We observed only a minimal overlap of the CD14bright/CD56+ monocyte subset with the well-characterized CD14bright/CD16+ intermediate monocyte subset (7.5% of the CD56+ monocytes coexpressed CD16).
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We ran PANDAseq with default parameters as well as with a minimal overlap setting of 10-bp.
A detailed analysis of the words identified a minimal overlap between the sets of overrepresented words for the different segments.
There was a minimal overlap in N content of leaf samples from early (0.166 0.412 mg cm−2) to late (0.075 0.197 mg cm−2) years, which introduces a potential confounding effect of N × year, and which prohibited further refinement of the ∼0.2 mg cm−2 N response threshold.
We searched against pathways as defined by KEGG [ 76], with a minimal overlap with the input list of 5 and a p-value cutoff of 0.0001.
For instance, Yang et al. [ 17] have reported a minimal overlap and very different functional categories of sexually dimorphic genes in brain, liver, adipose and muscle of mice.
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