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Devising and disclosing a method for listing all approved projects that are accessing the data and/or samples could alleviate this.
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We proposed a novel method for listing long approximate STRs with mutations in personal genomes using a massive number of short reads of length ∼100 bp.
In that publication [ 1], we described a method for reducing the list of genes needed to predict clinical outcomes to fewer than 100.
The software uses Gene Ontology (GO) terms as gene lists and gene score resampling was used as a method for analyzing significant gene lists.
The effects of cross-hybridization were analyzed using a "nearest neighbor" classifier applied to array probes; we describe a method for determining potential "black list" regions whose signals are unreliable.
Recently, IDR analysis of replicate datasets (Li et al. 2011; ENCODE Project Consortium 2012; Landt et al. 2012) emerged as a robust method for deriving lists of reproducible occupancy sites from ChIP-seq datasets.
On the base of financial ratios attributes and one class attribute, adopting entropy-based discretization method, a data mining model for listed companies' financial distress prediction is designed.
We estimate completeness of ascertainment of causes using capture-recapture methods, and discuss the implications of using systematic review methods for lists of causation, paying attention to the issue of publication bias.
b Analyses limited to those who are occasional or frequent users of any drug (see methods for list).
This interaction model performed better than all other tested models (Akaike's Information Criterion = 669.3; all other models AIC > 670.8; see Methods for list of models).
We could confirm this finding using eleven mammalian genomes which we analyzed in addition to the 62 genomes we just discussed (see Methods for list of genome names).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com