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In future, similar minimal panels of maximum assignment power could be developed from current studies and tailored to specific regional management issues.
The finalized peak lists used for the structural calculations before refinement were produced through several rounds of manual peak checks and automated unbiased NOE assignment runs using the CANDID module, aiming for optimum cycle1 and final CYANA target function values, maximum assignment percentages and numbers of generated constraints and improved structural parameters.
The second prediction used a Maximum Likelihood assignment where the predicted tissue of origin was simply the one with the largest P (T j ), or Undetermined if P (und) was larger than any P (T j ).
Inspection of the top ten Pfams shows a remarkable count for sulfatase (PF00884) assignments in lower layers with a maximum of 135 assignments in the fifth layer (4-5 mm depth), which is in accordance with the results in [ 26].
The assignment rule was defined to have a maximum coverage of all assignments made by these SSAMs.
A threshold level for the posterior probability of Q = 0.9 was used, in order to reach maximum assignment efficiency.
Violent behavior gets a SHU assignment of a maximum of five years.
A flow in of total value k where each edge has capacity 1 corresponds to a maximum matching and thus a valid assignment of haplotype paths to haplotypes of the phasing at level l.
The search for new SDMA sets continues using this method until a feasible SDMA set assignment is found or a maximum number of iterations is reached.
We must then impose some further constraint that narrows the field to a smaller family in which there is an assignment of maximum entropy.[3] This constraint has to be imposed from outside as background knowledge, but there is no general theory of which external constraint should be applied when.
The remaining sequences had one-to-many assignments of up to a maximum of 16 different signatures to a single contig [see Additional file 3].
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