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The power of QTL detection in a mating design involving multiple crosses depends not only on QTL effects, but also on allele frequency (Table 2; Fig. 2).
Wu [29] used a mating design with clonal replicates to identify the significant contribution of high-order epistasis to genetic variation in stem wood growth traits in poplars.
More recently, Stich et al. [15] developed a linkage mapping approach to uncover three-way interactions among different quantitative trait loci (QTLs) using a mating design.
To be considered narrow-sense, the heritability estimate had to be derived from population with a mating design (or system) that included full-sib families nested within half-sib families or from mid-parent or sire offspring regression (Roff 1997).
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This study focused on complex fruit quality traits that are commonly selected for by apple breeders, using a training population of 1120 seedlings (seven full sib families in a factorial mating design) within an ongoing scion breeding program, to ensure relevance.
In this study, heritability for shell color-related traits was estimated in the golden shell strain of Pacific oyster by fostering a single cohort of 30 families in a nested mating design consisting of 10 sires and 30 dams.
Across generations, a total of 512 males were mated in a nested mating design to 941 females to produce 81,429 tagged progenies.
The maize NAM population is a reference mating design (in which all biparental families have a common parent), which represents one extreme of multiple family designs.
To facilitate the rapid production of paternal half-sibs, we recommend using a group mating design with single males and multiple females in a single tank.
Twenty families were produced per cross type, using a balanced mating design in which the same ten females and ten males from a parental cross type, i.e., ECO, GRV, STW, F1 E.S, and F1 G.S, were represented in each cross type.
Simulated populations resulted from a nested mating design (1 sire to 2 dams).
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