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A library is provided for access methods.
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If a reference spectrum library is provided, NTFD identifies as many compounds as possible.
A Python programming library is provided to facilitate access to the FAST5 file structure and enable other researchers to extend the tools and create new analytical methods.
Availability: The library is provided as a Ruby Gem from https://rubygems.org/gems/bio-svgenes under the MIT license, and open source code is available at https://github.com/danmaclean/bioruby-svgenes also under the MIT License.
Our library is provided with an interface to the widely-used CFD solver OpenFOAM®, and can be easily connected to any other software package via interface modules.
Further information on the chemical library is provided in the Supplemental Material (available online at doi 10.1289/ehp.0901392).
Further details regarding the sequencing of each library is provided in Additional file 1: Table S6.
The number of reads per individual RNA-seq library is provided in Additional file 1: Table S1.
In addition, the top ten Blast hits are listed for each contig in Additional file 2. Information on the ESTs from which each contig is built, including GenBank accession number and source library, is provided (Additional file 3).
The summary of run and alignment statistics for all libraries is provided in Additional File 1.
Detailed functional annotation statistics for a cDNA library are provided in the 'statistics' link on the GarlicESTdb webpage.
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