Sentence examples for a larger alignment from inspiring English sources

A larger alignment of 831 CarD sequences is included (Source code 1 ).

This region of sequence divergence is also observed in a larger alignment  [ 10] of EF-Tu molecules from Gram-negative organisms (data not shown).

We expect that a more efficient pairwise potential optimization algorithm that can search a larger alignment space will further improve the alignment accuracy.

After every sequence has been either placed in an alignment or placed as a "singleton," the individual alignments are then profiled to a larger alignment.

This means that, should both genes be concatenated to form a larger alignment, different context-dependent codon partition models may need to be used for each gene to perform accurate phylogenetic reconstruction for such a concatenated alignment.

To improve resolution of GLDH phylogeny, an individual phylogenetic analysis was performed using a larger alignment (302 amino acids) with greater taxonomic sampling (151 sequences), although relationships between major taxonomic groups remain poorly resolved.

Multigene concatenation proposes that phylogenetic analysis should always be performed using all available character data, essentially sticking many aligned genes together to give a large alignment.

Because ML phylogenetic inference is NP complete [6], no practical method can guarantee that it will find the optimal topology for a large alignment.

To reduce the cost resulting from a large alignment target, many algorithms have been developed that rapidly reduce the size of the search target for aligning a given read.

The authors then proceed to identify sets of mutations that might be suitable drug targets, through an analysis of covariation in a large alignment of HIV sequences.

We found a large alignment between CardioNet and both mitochondrial networks with 90.48% and 92.49% of the mitochondrial network reactions are represented in CardioNet.