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The term was combined with enkyklios ("complete system," or "circle") to identify a large compendium of general education, hence "encyclopaedia".
His magnum opus, al-Hikma al-muta'aliya fi-l-asfar al-'aqliyya al-arba'a, known as al-Asfar al-arba'a (The Four Journeys), is a large compendium of philosophy and theology that, instead of following the traditional divisions of logic, physics, and metaphysics, maps intellectual inquiry upon a mystical metaphor of the soul's journey in this world.
We used a large compendium of mRNA signatures derived from cells treated with drugs to investigate the mechanism of action of CG-mediated cytotoxicity [24].
It unifies a large compendium of other published cancer microarray data, including Gene Expression Omnibus (GEO) [19] and Stanford Microarray Database (SMD) [20], and uniquely provides differential expression analyses comparing most major types of cancer with their respective normal tissues.
To generate hypotheses regarding the mechanism of action, we used the Connectivity Map (CMAP) [18], which is a large compendium of gene expression signatures from drug-treated cell lines.
In order to account for the dynamic properties of proteins as well as their dynamic relationship with their neighbors in the network, we used gene expression information from a large compendium of microarray data and a high quality collection of protein interaction data to derive 9 network metrics that describe the dynamic behavior of a protein and of its neighborhood in the network (see Methods).
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A larger compendium of drug cytokine mix hepatotoxicity data demonstrated that hepatotoxicity synergies were largely potentiated by TNF, IL-1α, and LPS within the context of multi-cytokine mixes.
Instead of the cell cycle gene expression data from Spellman et al. we included the data from Mnaimneh et al., a larger compendium of gene expression profiles [ 23].
Moreover they are available in an increasingly large compendium of spectrally-distinct variants.
Applied to this large compendium of data sets, meta-analyses demonstrated that conserved patterns between species could be identified.
The CentriMo website currently provides one large compendium of RBP motifs [ 5] and users can also upload their own sets of motifs.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com