Sentence examples for a large alignment of from inspiring English sources

The authors then proceed to identify sets of mutations that might be suitable drug targets, through an analysis of covariation in a large alignment of HIV sequences.

A large alignment of 1002 primary σ subunit sequences has been generated (included as Supplementary file 1), and a sub-alignment is depicted in Figure 1 figure supplement 3. Specific information on the conservation of RNAP β′ and σA residues is also tabulated in Supplementary files 2 and 3. e) The authors should reconsider the use of the term 'σ-finger'.

A larger alignment of 831 CarD sequences is included (Source code 1 ).

– Given a polynomial time algorithm for finding a largest alignment of RMSD below a threshold d, one can efficiently compute an alignment of a given size ℓ which minimizes the RMSD (Theorem 7).

In summary, our large alignment of 11,959 positions strongly rejects the grouping of acoels with platyhelminths, and more generally protostomes.

The phylogeny of the large alignment of MenFD was inferred using MrBayes [ 48].

This region of sequence divergence is also observed in a larger alignment  [ 10] of EF-Tu molecules from Gram-negative organisms (data not shown).

The sequences shown were selected from diverse phyla/groups taken from a much larger alignment of 1002 sequences.

Roure et al. [ 9] develop SCaFoS, a software to help handling large alignments of putatively orthologous sequences.

After clarifying that lager brewing yeast was a hybrid between S. cerevisiae and S. bayanus, we annotated the ORFs of the lager brewing yeast and produced a large-scale alignment of genomic regions by aligning the lager brewing yeast genome with the S. cerevisiae S288C and S. bayanus CBS 7001 genomes (see Materials and methods).

However, comparative analysis requires a large multi-alignment of available homologous sequences, which presently makes it not eligible approach for long and not conserved sequences of RNAs.