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Wang et al. [50] proposed to convert the low-level features into a keyword sequence for their HMM classifier by using Viterbi algorithm.
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The present human recombinant insulin case study shows an assessment of keyword, sequence and classification search strategies for establishing biopharmaceutical drug-centric patent landscapes.
Keyword searches were undertaken as simple pattern matches where the keyword sequence of characters was identified anywhere in the total free text record irrespective of word boundaries.
As a result, from the project page http://www.inra.fr/lepidodb/spodoptera_littoralis one can retrieve the whole sequence set, query with a keyword and retrieve the corresponding sequences.
tracheary elements [ 80] and secondly from a keyword strategy developed from sequences previously described as involved in primary and secondary cell wall biosynthesis and assembly for all species throughout the plant kingdom.
A data search can be performed by the input of a DNA sequence or a keyword.
The D. pulex genome database was screened for carbonic anhydrase-like sequences by a keyword search in the automatically-created annotations and by a 'blastp alignment search' of the Dappu v1.1 gene builds (July, 2007) [ 117].
Data retrieval can be conducted easily either by a keyword text search or by a sequence query via BLAST, and users can save records of interest for later investigation using tools such as multiple sequence alignment and BLAST searches against pre-defined databases.
Currently, GenBank will assign a BARCODE keyword to sequences that meet these standards.
Sequences were initially extracted from the Entrez database using a keyword search for 'histone', and removing non-histone sequences by using keyword searches such as 'histone-like'ubiquitin'in', and 'acetyl', yielding 54,646 results.
In addition, cnidarian bZIP sequences were retrieved, using a keyword search, from the NCBI protein database.
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