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What is considered a high marker for heart disease based on hs-CRP? A. Hs-CRP can be classified as low, average and high risk.
GWAS requires a high marker density that is now easily accessible due to GBS (genotyping by sequencing) as described by Elshire et al. (2011) or to the re-sequencing of the rice genome and the discovery of millions of single-nucleotide polymorphisms (SNPs) (Alexandrov et al. 2015).
The same trend in the fifth experiment was obtained (Table 4), indicating that our method works in large genomes with a high marker density.
The genetic map obtained from 779 BC1F1 plants, after a high marker saturation in the site of the structural variation, showed a complete absence of genetic recombination between the inversion breakpoints, in contrast to the recombination rates found in the rest of the 813 kb contig (Figure S3).
Many of the QTL profiles possess multiple peaks especially in regions with a high marker density.
The most obvious one is marker density, but most datasets used here have a high marker density.
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In variety Atlantic a high marker-assisted transformation frequency (71%) was observed whereas the other two varieties, Bintje and Potae9, had significantly lower marker-assisted transformation frequencies 10-133%) (Tables 5 and 6).
We demonstrate results similar to those from Beagle on another data set with a higher marker density.
As tropical japonicas appear to be a potential source of interesting quantitative resistance alleles, this subgroup should be specifically explored through GWAS using larger panels and a higher marker density in a context of high blast disease pressure or using broad spectrum blast strains mixtures.
A higher marker density would not lead to a higher mapping resolution in this pedigree [ 42].
These simulation results suggested that, for our analyses, a higher marker density would be required.
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