Sentence examples similar to a group of reference TSSs from inspiring English sources
TRANSPro defines a set of reference TSSs for each gene by a weighted combination of annotations from EPD, DBTSS, Ensembl, and Fantom [41] [44].
Supplementary table S4, Supplementary Material online, contains a fourth group of TSSs, that is, orphan TSSs in intergenic regions.
A group of naive animals was used as a reference.
Nevertheless, this software does not have a user-friendly interface for identifying TSSs with regulatory elements and efficiently analyzing combinatorial TFBSs of a group of promoters.
After a complete review of the TSSs set and comparison to the raw RNA-seq data set, 644 manually determined TSSs were added to the group of TSSs, while 731 false-positive TSSs and 119 TSSs located upstream of tRNA or rRNA genes were removed.
A score is assigned to each reference TSS according to spatial density and weights of relevant primary TSS annotations and the reference TSS with the highest score among several alternative TSSs of a particular gene is denoted "best supported".
Six studies compared data of registries with data from a reference group or reference period.
Results from the three TSS groups were compared with a control group of 149 patients (group D).
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