Exact(7)
All mismatches occurring within 5 bp of a gap were screened out.
Ambiguous regions and all sites including a gap were removed from the alignment.
Data for columns in which Anidu contained a gap were not considered for conserved motif selection.
Although gaps tend to occur in high-diversity regions, proteins that have a high fraction of gaps have reduced statistical support, yielding an artificially low entropy value; for this reason, positions where more than 50% of sequences contained a gap were discarded.
Columns in which the seed had a gap were removed.
Afterwards, all positions containing a gap were removed from the alignment and the amino acids were replaced by their corresponding codons.
(A ) Social interactions between subject and stimulus rats placed across a gap were documented using low- (30 Hz) and high-speed (250 Hz) cameras under infra-red (IR) illumination.
Similar(1)
"We decided that a gap is a gap".
Related(1)
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