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The best result for the RBF kernel is obtained with a gamma of 1.
For example, Austria has a gamma of 0.46, just below the median, but the third lowest conditional probability.
The SVM parameters were set to normalize data and use a gamma of 0.1 and C of 1.0, refined through experimentation.
Images were corrected with a gamma of 0.45 and spines were counted manually by scrolling through the z-stacks.
For mtDNA HVS1 sequences, genetic distances were estimated using the Kimura 2P model for molecular distance and a gamma of 0.25 (Kimura, 1980).
The condensed bootstrap maximum likelihood dendrogram was constructed from the General Time Reversible (GTR) model with a Gamma of 2.83 (+G) and an assumption that a fraction of sites (0.27) are evolutionarily invariable (+ I).
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Similarly for the K2P model, a transition/transversion ratio of 9.17, a proportion of invariable sites of 29% and a gamma shape of 0.44 were used.
103mRh has a half-life of 56 min and emits a gamma ray of energy 39.8 keV, so the gamma-decay of the rhodium isotope should follow soon after the beta-decay of the ruthenium isotope.
We also evaluated the use of either an exponential or a gamma distribution of times since insertion, with the exponential being a special case of the gamma.
A gamma model of rate heterogeneity was used with estimation of the proportion of invariable sites.
We used a Tamura (1992) model of nucleotide substitution with a gamma distribution of rates (discretized in n = 4 classes).
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