The lipid hierarchy was generated using custom software that takes as input a set of structures and a template file that specifies the required annotations for each of the corresponding higher levels and the relations that link them (Table 1).
The INFORM Lab simulator is driven by a configuration specification file that specifies the agents and their relationships, the environment, initial conditions as well as any scripted events.
In this case, she/he has to create a suitable configuration file that specifies all the parameters.
This REM analysis requires one top level "control file" that specifies various options and also lists the runs (data files) to be analyzed by REM.
It should be possible for other groups who utilize the ACeDB 'FMAP' gene structure editor to curate their gene structures to use the curation tool with very little modification apart from changing the configuration file that specifies how to find anomalies.
Specifies a file that will hold the observed and predicted data for the number of counts per row and the number of occurrences.
Specifies a file that holds the amount of lost observation time due to removed streak events for each row of each node.
The artificial portion of a semi-synthetic dataset can then be automatically combined with baseline patient distributions by specifying a file that contains the baseline data.
Perl and Python indexing scripts are provided that allow generation of metadata XML files for the query engine and a series of XML files that specify image properties such as tile sizes, zoom levels and pointers to the images in the tiling pyramid.
Our simulation has two components: a mobility simulator and a wireless network simulator, which are connected by trace files that specify the vehicle mobility during simulation.
