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The phrase "a different manner but" is not correct as it stands and lacks clarity in written English.
It can be used when contrasting two different ways of doing something, but it needs to be part of a complete sentence for proper context.
Example: "We approached the problem in a different manner but achieved similar results."
Alternatives: "in an alternative way yet" or "in a distinct fashion however".
Exact(3)
I would like to think that the usual suspects might behave [now] in a different manner, but we shall see… However, it might be seen as opportunistic to hold a snap election less than two years after the last one.
"EY Dubai has therefore discharged its obligations... Mr Rihan may have preferred that matters had been handled in a different manner, but that was not his decision to make".
However, students were presented with a sequencing technique, which does use electrophoresis to separate fragments and produce sequence data, albeit in a different manner, but the inclusion of this information may have contributed to the ambiguity in student posttest response.
Similar(57)
Each cage trap is set in a slightly different manner, but most have a trigger rod or knob that must be pulled or twisted out when opening the door of the cage.
He pledged to continue fighting President Obama's health care law, but in a different manner.
Today, insanity can still bring the gift of knowledge, but in a different manner.
Peter and his successors had recognized this need by appointing commissions to prepare a new code; none of the several efforts having reached a successful conclusion, Catherine tried to tackle the job again, but in a different manner.
"It's a particularly good compare-and-contrast opportunity to look at the way they arrived in about the same place but in a different manner," Mr. Warner said.
Our experiments address this same issue, but in a different manner from past research.
Essentially, it also explores the idea of strata [50, 51], but in a different manner.
M1 and CM2 are generated by alternative splicing, but in a different manner as described for influenza A virus.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com