Sentence examples for a database retrieving from inspiring English sources

Bibliometric indices (see above) are calculated using a citation database, defined as a database retrieving publications by which a given publication is cited.

Recall has as its numerator the number of relevant records in a database retrieved by a search strategy and as its denominator, the total number of relevant records in the database.

Furthermore, visualization tools also interact with the database retrieving subsets of the data points.

SNPchiMp v.3 ensures fast access to the database (retrieving within/across SNP array data) and the possibility of annotating SNP array data in a user-friendly fashion.

All these repeats in the custom library were compared to a Viridiplantae TE database retrieved from Repbase (http://www.girinst.org/repbase/index.html, update 20130422) (15) and a Plant Repeat Database (http://plantrepeats.plantbiology.msu.edu/index.html) (16), using tBLASTx and BLASTn.

Whereas for lungfish previous studies only reported a Z sequence [ 67], our analysis of the SRA database retrieved a lungfish classical MHCI sequence (Additional file 4: Text S1), underlining the long co-existence of the Z and classical lineages.

Using the open source search tool OMSSA (version 2.0.0) [25] the spectra were matched against an N. vitripennis sequence database retrieved from NCBI (http://www.ncbi.nlm.nih.gov/) containing additional trypsin and keratin sequences.

The gene network co-expression patterns were compared with a manually compiled protein-protein interactions (PPI) database retrieved from the Human Protein Reference Database HPRDD) [ 32, 33].

Functional annotation was initiated by using each sequence as a BLAST query [ 78] against the NCBI Non Redundant database retrieved 2012-09-14 [ 79] (e-value < 1E-0.6) and the Uniprot SwissProt Fungi protein database retrieved 2012-04-30 [ 80] (e-value < 1E-0.7).

Using the FPEGT motif and an adjacent 30 aa of AtLPEAT1 in a BLAST search of the non-redundant protein database retrieved exclusively this family.

A bibliographic search using "Toscana virus" as keyword in the PubMed database retrieved 54 research and review articles.