Previously, a database characterizing examples of Embryophyte gene family lineages showing evidence of positive selection was reported.
Each of the nine centers maintained a robust database characterized by prospective data collection, creating an additional important strength of this investigation: the breadth of demographic, clinical outcome, and glycemic data available for analysis.
Our group has developed a database that characterizes the known mutations and sequence variants in BTD.
The data presented in this study suggest that it is feasible to develop a database of characterized mutants with deletions that span regions of interest in the genome.
A blastp search on Stagonospora nodorum protein database characterized the predicted protein SNU00161 (The Broad Institute Accession Number) as another possible fungal homolog of TbDHN1.
In particular, we have searched accurately the template for our modeling procedure using a database of structurally characterized families of membrane proteins with 7 helix topology (http://opm.phar.umich.edu/) as well as a fold recognition program LOOPP [25].
Additional HMM evidence and matches to a database of experimentally characterized genes maintained in house sometimes provided greater specificity to the corresponding gene name.
It provides a database of all characterized strains of a group of similar species (in this case, all of the 420 streptococcal strains characterized by MLSA), to which new strains can be added by the user community.
In order to extract regulatory motifs that are overrepresented among genes in a cluster, we used a database of previously characterized motifs and searched for occurrences of these motifs in the promoter regions of the genes.
We have developed a mutation database that characterizes the known variants in the SPRED1 gene in an effort to facilitate this process for testing and interpreting results.
