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In silico analysis of gene targets was performed using a customised program for BLAST and sequence alignments [ 9].
In silico analysis of gene targets was performed using a customised program for BLAST and sequence alignments [ 12].
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A customised program was used for data reduction and further analyses (MAHUffe; http://www.mrc-epid.cam.ac.uk).ac.uk
We therefore included a number of other TM-prediction and motif-recognition programs, including a customised program to look for LRR domains (LRRscan, see below) in the pipeline.
Because degenerate or atypical LRRs have been described [ 4, 49, 69] that do not match the consensus motifs defined by SMART and Pfam we designed a customised program, LRRscan, to search for a minimal consensus that defines animal extracellular LRRs.
For this reason, using a similar strategy to Smits and colleagues [ 69], we wrote a customised program, LRRscan, to search for a more inclusive minimal consensus that defines LRRs as well as searching for consensus sequences derived from non-canonical LRR-CT domains (see Methods for details).
A customised program (MAHUffe; www.mrc-epid.cam.ac.uk) was used for data cleaning and reduction.
22 23 The retinal images were processed with a customised program coded using MATLAB R2010a (MathWorks Inc, Natick, Massachusetts, USA), similar to a previously described method by Li and Roorda.
Apps - customised programs for the Apple iPhone - are all the rage, allowing users to turn their phone into anything from a TV remote to a virtual pint.
A customised LabView program generated summary statistics for average time in each activity for each participant on weekdays, weekend days and over the whole week.
The signals were acquired and analysed by a customised computer program (LabView; National Instruments, Austin, Texas, USA).
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