Forth also provides a facility by which a programmer can define new application-specific defining words, specifying both a custom defining behavior and instance behavior.
Then the MCS executes the Petri net in real-time over an architecture abstraction layer that communicates with a particular control architecture using a set of custom defined actions and events.
When the data is in the right format, the generic plotter tool can be used to visualise the BAF, and we have also implemented a plot tool to display allele frequencies directly from a CG masterVar file, again with the capability of displaying single-chromosome plots, all chromosomes in a single image, or custom defined regions.
The values of and for the risk regions are basically custom defined and chosen to comply with regulatory requirements.
The figure here (Figure 6) defines the risk regions more precisely than Figure 2. Note that the risk regions can be custom defined based on the values of and that define the curves and, respectively.
In line with their attenuated transcriptional activity we observed a profound shrinkage of nucleoli in monocytes and granulocytes (Additional file 7) and a decrease of RNA Pol II Ser2P/Ser5P signals defined both by recorded pixels and by custom defined spots (Fig. 8).
The latter manages the storage of experimental metadata, which can be collectively searched and browsed via a query interface or web services; the destination for associated data files, and their protocol for transfer, is custom defined by the local administrator on installation.
The output is either a whole-genome plot, per-chromosome plots, a single image containing all the per-chromosome plots together, or a plot of a custom region defined by the user (e.g., a plot showing just chromosomes 3, 5, and X, or a plot showing a specific range within a single chromosome).
This data is all organizable by device type, geography, experiment and variation allocation, as well as any customer defined custom variables.
