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The transcriptional correlation network contains an edge connecting two genes if their expression profiles are highly correlated (see Methods section).
When two connected components merge in such a way, this represents a bottleneck connecting two regions.
A road segment was usually a line connecting two junctions.
Correlation networks were obtained by connecting two genes with an edge if the absolute value of their correlation was higher than a predefined threshold.
A branch connects two nodes together and can also connect a node and a leaf.
An edge in a phylogeny tree connects two disjoint subtrees.
In each figure, the node denotes a topic and the edge connects two topics (we removed the edges whose correlation values are less than a threshold).
Since GcFlasso uses only the information on the presence or absence of edges, when edges of weak correlation connect nodes across two true subgraphs, GcFlasso is unable to ignore the weak edges and fuses the effect of SNPs on the phenotypes across those two subgraphs.
Terminal edges connect a leaf with an inner node and inner edges connect two inner nodes.
So far, the MRI images have shown a correlation between poor phonological awareness in kindergartners and the size of a brain structure known as the arcuate fasciculus, which connects two language-processing centers.
Once you've connected one, wait for a while, and then try and connect with another!
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com