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There is plenty of experimental data related to integral test facilities (ITFs) that constitute macroscopic systems behavior information and a consolidated data base for such purposes.
NUgene has access to participants' clinical care data via a consolidated data warehouse.
After three major processing steps, it outputs a consolidated data set, in PSI-MI TAB 2.6 format, containing only the 36 standard columns (Supplementary Table 1).
As seen in the Venn diagram of Figure 2, two thirds of Liverome's collection (68 articles) represents a consolidated data coverage of all other resources while one third (30 articles) is unique to Liverome.
To achieve the goal of constructing non-redundant, consistently annotated and up-to-date reference data sets, we developed a script, called ppiTrim, that processes iRefIndex and produces a consolidated data set of physical protein protein interactions within a single organism.
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We address this problem by broadcasting a single consolidated data stream, aiming at reducing the amount of transmitted data.
Thanks to this consolidation process, iRefWeb affords a global view of the consolidated data, and enables the exploration of the known interaction partners for a protein of interest, regardless of the database(s) that contain the original information.
On the other hand, any third party maintaining a single, consolidated data-base would be carrying out what is essentially a government function with more expense, more legal ambiguity, and a doubtful impact on public confidence that their privacy is being protected.
This should include standardized reporting of foodborne incidents and a national repository for consolidated data on these incidents.
It also allowed us to build a scenario where the information is extracted from the inputs of the eServices platform into a DW leading to consolidated data.
Finally, we have shown how the rich graphical and numerical summaries of the consolidated data provide a valuable snapshot of the known PPI landscape across different organisms and databases.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com