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Nitrate is the most abundant N species in ocean environments, a complete pathway of denitrification exists in A. longa SW024T, helping the bacterium acquire energy by this process.
In addition, although Th78T is unable to reduce nitrate to nitrite (due to the lack of nitrate reductase), a complete pathway of denitrification converting nitrite to nitrogen in the low oxygen environment can be found in its genome.
For nitrogen metabolism, a complete pathway of denitrification was found in the genome of A. longa SW024T, which is the process of converting nitrate (NO3−) to nitrite (NO2−), nitric oxide (NO), nitrous oxide (N2O) and dinitrogen gas (N2), making use of N oxides as terminal electron acceptors for cellular bioenergetics.
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The results suggest that pro-longed regular consumption of beef and/or vegetables raised in the TR FP, a region documented to have widespread and high levels of dioxin contamination of FP sediments, can be a completed pathway of human exposure.
It contains a complete pathway for biosynthesis of chorismate, which serves as a precursor of aromatic amino acids.
These findings associated to the reconstruction of a complete pathway for the biosynthesis of terpenoid backbones in L. dendroidea are important steps to enable the heterologous biosynthesis of terpenes of interest, such as -elatol, in genetically modified organisms.
A complete pathway for degradation of oxalate was revealed from the genome analysis.
Furthermore, the inclusion of some reactions in the metabolic reconstruction of A. nidulans was supported solely by physiological evidence (e.g. the ability to grow on a certain sugar as the sole carbon and energy sources require a transporter and a complete pathway for metabolism of this sugar).
Recent advances in this area include the discovery of a new heme biosynthetic pathway [ 69], further understanding of the pathway of cobalamin biosynthesis, and the reconstruction of a complete pathway for coenzyme F420 biosynthesis in haloarchaea.
The presence of an NAGK coding sequence in the 'Ca. L. solanacearum' genome indicates that the ZC bacterium has a complete pathway for the production of arginine from glutamate (Figure 5).
In conjunction with a non-ribosomal peptide synthetase, these genes provide a complete pathway for the synthesis of catechol siderophores with chorismate as the precursor [ 145].
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