The phrase "a compilation of proteins" is correct and usable in written English.
It can be used when referring to a collection or grouping of different proteins, often in a scientific or biological context.
Example: "The research focused on a compilation of proteins that play a crucial role in cellular function."
Alternatives: "a collection of proteins" or "an assembly of proteins".
Performing a similar analysis on a compilation of protein-protein interactions derived from multiple high-throughput sources (the Interologous Interaction Database - I2D) in with the Edge Weight (K I2D ) is defined as the number of protein-protein interaction databases containing a given revealed a similar distribution.
Attempts to find common characteristics for protein-protein recognition sites have only been moderately successful, since the average binding epitope of a large compilation of protein-protein interfaces is almost indistinguishable from a regular protein surface [ 51].
The first was a compilation of RefSeq and Uniprot proteins electronically annotated (GO evidence code "IEA") with identical GO terms as in our training and test set.
Additionally, we provide a compilation of the c. 1200 proteins forming the E. coli K-12 cell-envelope-predicted proteome according to different proteomic and bioinformatic tools and their current annotations in various databases, together with an update of previous studies (Rey et al., 2005b; Gardy & Brinkman, 2006) assessing the performance of these tools.
We utilized a compilation of 702 experimentally obtained protein interactions between the human host and HIV-1, accounting for interactions that have been found in vital cells in the human immune system such as helper T cells, macrophages and dendritic cells [24].
A compilation of current E. coli protein annotations and subcellular localizations according to different experimental and bioinformatic approaches is provided in Supporting Information, Table S1.
Here, we utilized a compilation of 702 experimentally verified physical protein interactions between 17 HIV-1 and 519 human proteins.
This bioinformatics compilation of proteins containing the AMPK phosphorylation consensus sequence represents a novel database for putative AMPK targets and suggests the involvement of AMPK in cellular functions spanning both top-down (receptor response to stimulus) and bottom-up perspectives (transcriptional regulation for cellular functions).
A similar approach was carried out where each of Arabidopsis and rice genome sequences was scanned against protein family profiles obtained from the NCBI National Centre for Biotechnology Informationn) conserved domain database (NCBI-CDD[ 18]), a compilation of multiple sequence alignments representing protein domains.
However, a publishable study should not be merely a compilation of available sequences for a protein family of interest followed by some standard analyses, unless it specifically addresses a scientific hypothesis or question.
The regulation and production of the abalone shell is at least an order more complex than has been inferred from a compilation of previous studies on shell matrix proteins in numerous other molluscs as acknowledged by Marin and Luquet [ 39].
