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However, our experience suggests that, in breast cancer patient populations, predicting clinical variables from gene expression data is complicated by a common correlation between ER-α status and the clinical parameters studied.
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The triple variables x1 - x3, x4 - x6, x7 - x9,..., x298 - x300 within each group are highly correlated with a common correlation γ and there are no correlations between groups.
When the more common correlation between genotype dosage and true genotype (runcorrected) was used, an imputation accuracy of 0.84 was obtained.
Likewise, the higher order interaction random effects assume common correlations between all observations that had the same level of the corresponding combination of factors.
Most patterns mined characterize common correlations between traits, which are already well known.
If this correlation is less than twice as large in MZ twins compared to DZ twins, there is a common environmental correlation between the two traits.
If it were parameterised as a lower common environmental correlation between males and females, the same model fit would be obtained.
Second, we applied the proposed multitask regression to learn a common template of correlation between genes and cell cycle data for the two inhibitors (e.g. CI1040 and Iressa), as shown in Figure 10.
To make full use of within-array duplicated spots, LIMMA's pooled correlation method [ 20] was used to estimate the strength of the correlation between duplicated spots by fitting separate linear models to the expression data for each gene, but with a common value for between-replicate correlations.
Unfortunately, we have not found any common statistical correlation between outliers and IC50 values.
Those data meet observations already made by Ruiz-Herrera et al. [ 27] who showed a weak correlation between common fragile sites and evolutionary breakpoints and a more significant correlation between evolutionary breakpoints and rare fragile sites.
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