The negatively charged residues following GADD45 β α-helix interact through a cluster of electrostatic interactions with the positively charged residues of MKK7.
Four of the top five ranked miRNAs were found to comprise a cluster of predicted interactions with shared target mRNAs (Fig. 6).
The complete reorientation of the T347 side chain provokes the disruption of a cluster of hydrophobic interactions, which hold together H3, H11, and the loop preceding H12, thereby destabilizing the AF-2 surface.
The visualization of the corresponding sub-network (see Fig. 3) reveals a dense cluster of interactions that interlink the PD gene set with the interleukin-6 pathway.
At the center of the network, a tight cluster of interaction between hydrolase, ATPase and transmembrane transport activity is depicted.
For example, g can be a cluster of SNPs in genetic interaction networks as these SNPs might influence on the same traits jointly.
The algorithm based on link communities performs a hierarchical clustering of interactions and considers a module to be a set of closely interrelated interactions.
In recent years, a cluster of studies have explored cellular interactions with clay nanoparticles alone or in combination with polymeric matrices.
In this regard, we identified a cluster of Toll pathway related protein interactions, and predicted the potential link between the Toll pathway, RNAi pathway and expression of heat shock proteins.
This algorithm performs a hierarchical clustering of interactions, that is, instead of assuming that a functional module is a set of nodes with many interactions between them, it considers a module to be a set of closely interrelated interactions.
A cluster of genes co-regulated in interaction with both host plants is shown in Figure 2B, annotated by JGI protein model ID number.
