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In this process a cluster arises from the set of all ESTs, which overlap at a given genomic location.
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In our 1D-SOM algorithm, a particular cluster arises from a group of marker candidates assigned to one of K "prototype" vectors w k ∈ ℝ d for k = 1,..., K.
In a MUL-tree T on ℳ each cluster arises from some branch e in T, and contains the labels a in ℳ with the property that we have to traverse branch e on the path from the root r to a in T. We also say that T exhibits these clusters.
The SNRPN gene in the PWS/AS cluster arose from a tandem duplication of the SNRPB gene so its syntenic relationship with imprinted GNAS is of interest.
The conservation of domains and introns argue that the monocot class I genes are PAB5 orthologs and not PAB1 orthologs, consistent with the conclusion that the PAB1 cluster arose from a recent duplication of PAB3 or PAB5 within the Brassicaceae.
The mir-15 cluster arose from an old tandem duplication.
In this situation the cluster arising from e' is not counted as an additional copy and can rather be viewed as an artifact of the restriction to ℳ and will, therefore, not be included in.
If the AF cluster arose from rearrangements of gene and/or gene modules in an ancestral Aspergillus species, then the signature of cluster reorganization may still be evident in descendent species.
Interestingly, this cluster arose from one of the progenitor of maize before allotetraploidization, whereas the 19-kDa α-zein cluster on chromosome 1 and 4 arose from the other homeolog (Xu and Messing 2008).
They suggest that all miRNAs in this cluster arise from the same multi-cistronic transcript when driven by MEF2, and this is consistent with a transcriptional basis of their up-regulation during learning.
The volume of the Dac-expressing cell cluster, although difficult to quantify, was roughly six- to eightfold greater than in control embryos, as would be expected if the cluster arose from the proliferation of 6-8 IPC NB lineages.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com