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The phrase "a certain order in" is correct and usable in written English.
It can be used when discussing the arrangement or organization of elements within a specific context or system.
Example: "There is a certain order in the way the chapters are structured that enhances the overall narrative."
Alternatives: "a specific arrangement in" or "a particular sequence in".
Exact(11)
"The CFTR protein has to fold in a certain order in a certain way to work properly, and the mutated cystic-fibrosis protein didn't fold quite right.
There were two study conditions, and each respondent participated in both in a certain order in May and October (Fig. 5).
Aristotle says in the Poetics that "to be beautiful, a living creature, and every whole made up of parts, must … present a certain order in its arrangement of parts" (Aristotle, volume 2, 2322 [1450b34]).
This led him to insist that space was " a certain order in the community of substances, and… time… the dynamic sequences of their states," confusedly apprehended (KRV A 275f/B 331f).
Hence space is independent of intuition in that it is the order of relations, and that order reflects or expresses the order of substances, which itself is independent of intuition.[18] Hence space is viewed as "a certain order in the community of substances," a variant of which Kant himself defended in the pre-critical period (see Friedman's introduction to Metaphysical Foundations, 174).
The conventional exploration model that the oil and gas (O&G) industry has been using for decades involves a certain order in the use of geophysical investigation tools, according to the level of knowledge and the size of the area being investigated.
Similar(47)
Poincaré is in sympathy with this, and points out that the orthodox mathematical continuum 'is only a collection of individuals ranged in a certain order, infinite in number, true, but exterior to one another.
So habit or custom produces a certain order of ideas in a person's mind.
The order of these modules does not indicate a certain order of events in a patient.
There is a certain order of preference in which a good offence is the best defence.
Then, always feed them in a certain order (such as the order of the colors in a rainbow).
More suggestions(1)
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com