Project name: Protein Structure Prediction Pipeline Project download page: http://www.bhsai.org/structure2.html Operating system: Linux Programming languages: Perl5, tcsh, and C++ The authors express their gratitude to the developers of the numerous open-source and freely available programs implemented in the pipeline.
A typical station will produce about one third of its programming locally and get the rest from NPR and other programming sources available via satellite.
We used the Gnuplot program (open source, available at http://www.gnuplot.info) to produce the histograms and plots presented herein.
The SR and lysosomal membranes were outlined, highlighted and measured in pixels using the Inkscape software program (open source, available at http://www.inkscape.org), converting the pixel measurements to nm using the scale bar in the recorded micrographs.
I have no programming skills but, like many people, feel confident enough to have set up a few websites - two basic information websites, a few weblogs and two bulletin boards using the open source phpBB program (available free at phpbb.com).
Raw fluorescence readings were imported into the LRE Analyzer (Version 0.8.7), an open source Java program available for download [ 79, 80].
Deconvolution of data was performed using XCMS, running on R version 2.6.0, an open-source deconvolution program available for LC-MS data (Smith et al., 2006) using identical settings to those reported previously (Dunn et al., 2008).
Deconvolution of the NetCDF format files were performed using the XCMS software, an open-source deconvolution program available for LC-MS data as described previously [ 58] and each detected metabolic feature was normalized to the QC sample using quality control-robust loess signal correction (QC-RLSC) [ 57].
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Various conformation-generating algorithms are commonly used in commercially available programs and open source wares.
Are there additional funding sources available to supplement a COLUMBIA COLLEGE SUMMER FUNDING PROGRAM award?
