Sentence examples for Reference cluster from inspiring English sources

The algorithm clusters the same data multiple times, and compares the reference cluster to model clusterings.

In this spider diagram, points derived from cluster of interest that are plotted on the x-axis (where y = 0) refer to no difference from the reference cluster.

We used 25 model clusterings to compare with the reference cluster.

We calculate the percentage differences between each group and a reference cluster.

The number of molecules selected to each reference cluster shows variation that reflects the intention of designing the reference data set.

For each cluster, values of the variables are averaged over sites that fall within the cluster and then fingerprints are developed by plotting spider diagrams with the log of the ratio of the median value for each variable in the cluster of interest to the median value for sites in the reference cluster (Wayland et al. 2003).

The quality of the clusterings produced by the tools was compared to the reference clustering using sensitivity (SE) and the Jaccard index (JI).

The case is a bit more difficult for overlapping reference clusterings as in the case of the protein-protein-interaction network where no simple reference clustering exists.

Sequences were then clustered into operational taxonomic units (OTUs, 97% similarity) with UCLUST (Edgar, 2010) using the open reference clustering protocol (http://qiime.org/tutorials/open_reference_illumina_processing.html).html

A search for GG-SpaD-related sequences in the UniProt Reference Clusters database and their alignment was carried out using tools from the UniprotKB site (http://www.uniprot.org/).org/

Use of hydrosheared DNA for ddPCR resulted in better separation of target and reference clusters from quenched droplets compared with heated DNA or non-treated DNA.