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Indels and premature stop codons mapped on the species tree for pseudogenized taste receptor genes.
RNA reads were mapped using our StrongARM pipeline, described previously26.
Sekiya, T., Takeishi, K. & Ukita, T. Specificity of yeast glutamic acid transfer RNA for codon recognition.
And the trees based on other genes show different maps that do not agree with the ribosomal RNA map.
Ule, J. et al. An RNA map predicting Nova-dependent splicing regulation.
Target RNA omit maps contoured at 3σ (grey mesh).
Kapranov, P. et al. RNA maps reveal new RNA classes and a possible function for pervasive transcription.
Further, these positive-testing smORFs from non-coding RNAs show codon read-phasing.
For 72 genes, 66 CDS and 6 RNAs, TSS mapping predicted the primary TSS internal and downstream of the annotated gene start, suggesting that an incorrect start codon might have been predicted and the gene is shorter than annotated.
Small RNAs were mapped to the genome using PatMaN.
More small RNAs were mapped in the sense chains.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com