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We added functionality to (1) provide multi-dataset support, (2) integrate existing knowledge, and (3) enhance visualization and ease of parameter setting.
Version 4.0 can further integrate existing knowledge by adding a search bias towards sub-networks that contain (avoid) genes provided in a positive (negative) list.
To integrate existing knowledge about this decision process into a rigorous, analytical framework, we built a mathematical model of cell fate decisions mediated by autophagy.
Systems modeling approaches combined with experimental immunology studies can integrate existing knowledge and provide novel insights on rising trends and behaviors in biological processes such as CD4+ T cell differentiation and function.
54 Moore et al 55 argued that the information gleaned from GWAS data collected thus far has been limited by failure to integrate existing knowledge about disease pathology: the 'single SNP' analysis approach ignores the genomic and environmental context.
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The IRAT integrates existing knowledge, including information on virus transmissibility and disease severity, with expert opinion about potential pandemic viruses to assign relative risk scores to those viruses.
For example, by integrating existing knowledge from behavioral science, organization science, engineering and clinical research and applying this in simulated environments, technology can improve and redesign existing care processes as well as engineer new ones.
She felt anthropology was a science that would integrate all existing knowledge about humankind.
This work also demonstrated a procedure on how to integrate the existing knowledge to engineer a strain with industrial application potential.
The aim of the current meta-analysis was firstly to review and integrate the existing knowledge on learning, memory and fear conditioning in PTSD patients compared to healthy controls.
To build treatment algorithms that integrate all existing knowledge is currently the challenge.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com