In this alignment, the Heat spread Bosh and Haslem to the corners and yank Hibbert from his home under the rim.
In this alignment important residues were annotated and the residue numbers refer to the protein sequence of Aminobacter sp. DSM24754.
In this alignment, the 3DP1 sequences naturally terminate at the end of exon 5. Comparison of variants characterizing the A and B haplotypes was performed (Figure 3B, C).
In this alignment the central β-sheets are closer in space, even though an alignment that simultaneously superimposes both the central sheets and the binding sites is not possible due to the above-mentioned permutation.
In this alignment the hypothetical positions of a magnesium binding site and site of double stranded DNA binding in the ICP-8 protein are shown, potentially orienting a bound magnesium ion towards the bound DNA strand to permit, for example, magnesium dependent strand exchange typical of DBP proteins such as ICP-8.
In this alignment, an E-value of 0.001 and the table output format "-m8" was applied.
In this alignment, nt changes within 4 nt of gaps were excluded to remove potential biases caused by misalignment.
In this alignment, residues that are absolutely conserved and highly conserved are highlighted in red and yellow, respectively.
In this alignment, transcription factor binding sites (TFBS) are searched using position specific scoring matrices, employing PoSSuM [ 33, 34] and matrix libraries (JASPAR [ 35] and Transfac [ 36]).
In this alignment, a perfect match is obvious between the two proteins, excluding the extra 71 N-terminal amino acids of Micromonas sp. (bordered by a rounded rectangle).
In this alignment, the sub-map bcaccbb has emerged as a result of duplication/mutation events from the leftmost unit b.
