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The positions of the two markers indicate that they may both be in the same locus.
On the basis of the physical positions of the markers linked to the LOD peaks of these QTLs, we assume that they are in the same locus.
After removal of three CSNK2B SNPs that are located in the same locus previously reported by GWAS, we performed the LD analysis and found that rs3769201 and rs7604288 were in high LD.
The specific GR binding sequence did not impact sensitivity, and we instead attributed the response to a combination of additional transcription factors and chromatin accessibility acting in the same locus.
It is worth noting that the Pi alleles in the same locus from different donor plants are located either in the same genomic position (orthologues) or in different positions (paralogues).
When the mean value of two experiments was used in QTL analysis, 4 QTLs were detected in the same locus on chromosomes 1, 3, 7 and 9 except for chromosome 12 (data not shown).
The identification of opposite differential expression patterns in the same locus from both NSF45K and Affymetrix array platforms emphasizes the utility of current rice array data for studying alternative splicing events and provides independent experimental verification of both data sets.
All low scoring chains and copies (lower scoring elements in the same locus) are excluded.
Sometimes, all three types of metal-ion-efflux systems, e.g. RND-HME, P-ATPase, and CDF, occur in the same locus.
To confirm Pax6 in these five loci, qChIP assays were performed using primers corresponding to the "peak" regions and surrounding regions in the same locus.
CpG-methylated loci were characterized by the presence of EcoRI/MspI fragments and absence of EcoRI/HpaII fragments in the same locus [32], [33].
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