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Comparison of the sequences in given species indicated that (i) each chromosome harbors a distinct dif sequence, (ii) the main differences were found in the dif cent region and (iii) the dif xerD region was less variable than the dif xerC region (Figure 1B).
We assigned names of all individual CNGC members in given species in ascending order in accordance with group numbers on the basis of phylogenetic relationship with 20 Arabidopsis CNGCs (Supplementary Table S2).
Similar(58)
For example, if Arabidopsis protein X and Arabidopsis protein Y interact and both have two best hits in a given species, in that species there are 2 * 2 = 4 combinations.
When a gene existed in multiple copies in a given species, the copy with the most introns was used.
It is generally assumed than concerted evolution homogenizes individual rDNA repeats and produces a mostly uniform sequence in all repeats in a given species.
CNGCs in a given species were named in accordance with sequence similarity to Arabidopsis CNGCs in phylogenetic relationship.
In addition, the organisms in any given species population need not be perfectly fitted to their environments to survive and reproduce they only have to be adequate.
CaMs in a given species were named in accordance with sequence similarity to Arabidopsis CaMs.
We also calculated how many genes in a given species were conserved/diverged in both the two other species.
For the between-species comparisons, we used miRNAs expressed in all three species and for the between-tissues comparisons, we used miRNAs expressed in all compared tissues in a given species.
This supports potential transmission of C. burnetii between goats and cattle, presenting the potential for a switch in the dominant genotype found in a given species.
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