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On both testing collections, we have observed almost no difference in performance between the original HMMs (HO) and the models derived from them having insertion emission probabilities reset to the background (HB).
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Then we made alignments for the set of random sequences QV and determined the number of sequences having insertions or deletions within the region from t1 to t2.
The Abp region shows significant volatility with about half the strains tested having insertions and deletions over nearly the entire region.
We found an error rate of 1 200 bp (99.5% accuracy) similar to previous studies [ 43] with 15.2% of the transcripts having insertions or deletions in their sequence.
Elements of the Tc1-Mariner superfamily usually insert into TA sequences, while TEs of the Mutator superfamily have insertion sites that vary from 9 to 11 bp [ 15].
The combined configurations had insertion losses of 7 13 dB(A).
On the other hand, almost 80%% of highly expressed non-TE genes had insertion mutations.
The designed coupler has insertion loss better than 3.6 dB with a magnitude balance of 0 ± 1 dB over the frequency band 0.67 1.05 GHz.
Also, if residues have insertion codes, the distance with neighboring residues is calculated and discarded if structurally equivalent.
All strains closely related to EC1118 (line 59A to 3238-32), withethexceptionof of 6bpenciu, Eg25 and T73, had insertion sites similar to those of EC1118.
In conclusion, minimal introns <87 nt in size are more likely to have insertion mutations, whereas those >87 nt in size are more likely to delete sequences.
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