Sentence examples similar to Genomic data analysis pipeline from inspiring English sources

To identify further targets, we investigated the whole transcriptome of a PCFS4 mutant using Affymetrix Arabidopsis genomic tiling 1.0R array and developed a data analysis pipeline, termed RADPRE (Ratio-based Analysis of Differential mRNA Processing and Expression).

Our approach and data analysis pipeline can be applied to other polyploid species for which a homoeologue-specific genomic assembly is available to use as a reference.

Chen, X. & Ishwaran, H. Random forests for genomic data analysis.

We present Mango, a complete ChIA-PET data analysis pipeline that provides statistical confidence estimates for interactions and corrects for major sources of bias including differential peak enrichment and genomic proximity.Comparison to the existing software packages, ChIA-PET Tool and ChiaSig revealed that Mango interactions exhibit much better agreement with high-resolution Hi-C data.

The raw data will be sent to the NASA Ames Research Center's Science Processing Operations Center to be put through the data analysis pipeline, which was based on the Kepler data pipeline.

Click on any part of the data analysis pipeline below for details.

They were organized in topical sections named: network analysis and modelling; genomic data analysis; cancer data analysis; structure and interaction; HPC and CryoEM; machine and deep learning; data analysis and methodology; analysis and visualization tools; and RNA-Seq data analysis.

The obtained data were then subjected to a data analysis pipeline.

Image analysis and base calling of the raw sequencing data were performed using the Illumina data analysis pipeline v1.4.

We developed a data analysis pipeline and programs in-house (Gloor et al submitted).

We implemented our data analysis pipeline in R [ 59].