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For datasets with geographical information, they even produce an example map on Google Maps.
"For datasets the size of those the NSA collect, using algorithms is the only way to operate for certain tasks," says James Ball, the Guardian's data editor and part of the paper's NSA Files reporting team.
For datasets with interstimulus intervals longer than 8 seconds, temporal smoothing is not recommended since it decreases power.
For datasets where ligands are compound descriptors (GPCRs and adenosine receptors datasets), the interpretation was not conclusive.
For datasets with different percentage of DE genes, we had similar results.
For datasets I – III, we also show the 90% confidence interval (black bars) from the SWISS hypothesis test.
For datasets containing two long branches, model violation affected performance of ML and Bayesian inference differently.
For Datasets 1 3, the biological experiment, RNA processing and array hybridization were repeated three times.
For Datasets 1 3 array images were processed using Agilent Feature Extraction software version A.6.1.1.
For datasets using Illumina chips, we used chip-wise method using the rank invariant algorithm [ 41].
For datasets displaying non-normal distributions, non-parametric tests were also performed.
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