Sentence examples for Family alignment from inspiring English sources

Robert is the problem, turning aggressively possessive of Sam and threatened by what increasingly becomes a drift toward a new family alignment.

HMMs68 were built from each gene family alignment and were searched against the protein sequences of A. duranensis and A. ipaensis using HMMER.

Each family alignment was manually curated to ensure optimal alignments.

In order to further verify candidate miRNAs, mature miRNAs and pre-miRNAs from S. japonicum and S. mansoni genomes were subjected to family alignment processing using the ClustalW2 program (http://www.ebi.ac.uk/Tools/clustalw2/index.html).html

For the alignment of the entire order, each independent family alignment were organized into one FASTA file and submitted to the MAFFT ver. 6 alignment server using the E-INS-i strategy [26].

Evidence for recombination within each gene family alignment were tested for with the Pairwise Homoplasy Index (PHI) [44] and GARD [40] using nucleotide substitution models selected above and estimating substitution frequencies and a proportion of invariable sites from the data with 4 rate categories in a gamma distribution.

The two family alignments were aligned using a structural alignment of the two protein structures.

In the case of SerRS and ThrRS, the respective protein family alignments were subsequently aligned in an additional profile alignment step.

Altogether we identified 39527 coevolved site pairs from 803 family alignments.

Altogether we identified 39527 coevolved site pairs from the 803 family alignments with MIp Z-score cutoff of 4.0 or higher.

Because many of the family alignments are quite large (tens of megabytes), running these queries in parallel on the cluster would have overwhelmed the cluster's file server.