Expasy Translate

USAGE SUMMARY

The phrase "Expasy Translate" is not correct in written English as it seems to be a combination of a name and a verb without proper context.
It could be used when referring to the translation function of the Expasy database, which is a bioinformatics resource. Example: "To convert the protein sequence into its corresponding amino acids, you can use the Expasy Translate tool."

⚠ May contain grammatical issues

Science

Human-verified examples from authoritative sources

Exact Expressions

30 human-written examples

In silico translation (Expasy, translate tool [ 46]) and gene structure prediction (GENSCAN Web Server http://genes.mit.edu/GENSCAN.html, [ 47]) were performed on the opsin-like sequences retrieved from the draft genome of A. filiformis.

BMC Genomics

Using the ExPASy Translate Tool (Swiss Institute of Bioinformatics), all six possible translation initiation positions (3 each on 5′ and 3′ strands) were assessed to be devoid of protein coding capacity, yielding evidence that these are indeed small non-coding RNAs expressed during rickettsial infection of host endothelium.

BMC Genomics

Open reading frames were located with ORF finder (http://www.ncbi.nlm.nih.gov/gorf/), and translation was carried out using the ExPASy translate tool (http://web.expasy.org/translate/).org/translate/

BMC Plant Biology

Open reading frames and translation of the contigs were carried out with the ExPASy translate tool [ 10] and confirmed by BLASTx with the GenBank NR database comparison to related sequences, as well as by comparison among the T. aestivum caleosin sequences as the data set was developed.

BMC Genomics

Predicted protein sequences from genomic and EST sequences were obtained using the ExPASy Translate tool [ 40].

BMC Evolutionary Biology

Potential open reading frames (ORFs) were searched using the Expasy translate tool [ 75].

BMC Plant Biology

Human-verified similar examples from authoritative sources

Similar Expressions

30 human-written examples

ExPASy-Translate tool was used to predict amino acid sequences [42].

Plosone

Nucleotide sequence from the whole genome of Geobacillus sp. strain WSUCF1 [ 15] was translated to amino acid sequence using ExPASy-Translate tool (http://web.expasy.org/translate/).org/translate/

BMC Biotechnology

In the second method the cDNA sequence was translated to protein sequence (ExPASy-translate tool, SIB; Swiss Institute of Bioinformatics) and then homologous proteins were searched using FASTA/SSEARCH/GGSEARCH/RCH - Protein Similarity Search (EMBL-EBI).

BMC Plant Biology

Predicted open reading frames from potential salivary gland contigs were translated in silico using the ExPASy translator tool [ 68].

BMC Genomics

Genomic and cDNA sequences were translated to amino acids using Expasy's Translate Tool; the corresponding reading frame was determined based on the presence of the reported sequences for KETc1 and KETc7.

Plosone

Expert writing Tips

Best practice

When referring to the translation function of the Expasy database, use the phrase "Expasy translation tool" or "Expasy sequence translator" for better clarity.

Common error

Do not directly combine "Expasy" with "Translate" without context. Instead of saying 'I used Expasy Translate', specify 'I used the Expasy translation tool'.

Linguistic Context

The phrase, while not grammatically correct according to Ludwig AI, functions as a descriptor for a specific tool within the Expasy bioinformatics resource. In the examples provided, "Expasy Translate" is used to identify the tool used for translating nucleotide sequences into protein sequences.

Expression frequency: Uncommon

Frequent in

Science

100%

Less common in

News & Media

0%

Formal & Business

0%

Academia

0%

Ludwig's WRAP-UP

While the phrase "Expasy Translate" is commonly used to refer to the sequence translation tool within the Expasy database, it's grammatically imprecise. Ludwig AI suggests using more accurate phrases like "Expasy translation tool" or "Expasy sequence translator" to ensure clarity. The phrase is primarily used in scientific contexts, as shown by the various examples, all coming from scientific publications. When writing, remember to use precise terminology to avoid ambiguity and maintain grammatical correctness.

More alternative expressions

Phrases that express similar concepts, ordered by semantic similarity:

Expasy translation tool

Replaces 'Translate' with 'translation tool', clarifying the function being referred to.

Expasy sequence translator

Substitutes 'Translate' with 'sequence translator', offering a more descriptive term.

Expasy tool for translation

Reorders the phrase to emphasize the tool's purpose.

Use Expasy to translate sequences

Turns the phrase into an action-oriented instruction.

Expasy's translation function

Uses a possessive form to indicate the translation capability of Expasy.

Expasy translation service

Replaces 'Translate' with 'translation service', framing it as a provided feature.

Expasy's sequence translation tool

Combines 'sequence translation' for clarity and specifies it's a tool.

Expasy's translate feature

Referring to translate as a feature of Expasy.

Expasy DNA translation tool

Adds 'DNA' to specify the tool's function more precisely.

Employ Expasy for sequence translation

Offers a more formal and instruction-based rephrasing.

FAQs

How can I correctly refer to the translation tool within the Expasy database?

Instead of saying "Expasy Translate", it's better to use phrases like "Expasy translation tool" or "Expasy sequence translator". This provides a clearer grammatical structure.

What is the purpose of the "Expasy translation tool"?

The "Expasy translation tool" is used to convert nucleotide sequences into their corresponding amino acid sequences, aiding in protein identification and analysis.

Are there other tools similar to the "Expasy translation tool" for sequence translation?

Yes, other tools like the NCBI ORF Finder and various online sequence translation tools can perform similar functions, depending on your specific needs.

Is "Expasy Translate" grammatically correct?

According to Ludwig AI, the phrase "Expasy Translate" is grammatically incorrect as it combines a name and a verb without proper context. It's better to use "Expasy translation tool" or similar alternatives.