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AT-MD simulations were conducted as described in Tables 1 and 2. The final snapshots of selected CG-MD simulations were converted to AT representations using a CG-to-AT fragment-based protocol.
The CG configurations were used to generate AT representations of the system, which were subjected to AT-MD to further evaluate the stability of the complex and refine the predicted VS/toxin interface.
The conversion from CG models to AT representations was as described previously.
To refine the models, the final snapshots of the TM JM dimers predicted in the three repeat CG-MD simulations in the POPC POPS PIP2 bilayer were converted to atomistic (AT) representations, followed by short (0.1 μs) atomistic simulations.
"The review has looked at representations from across the board".
It pauses, too, to look at representations of Jesus from African, Asian and Latin American perspectives.
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He's like a smart-ass rebuke to the mechanicals' incompetence at representation.
Figures that are jiggered together from odd shapes and objects that are reduced to simple geometries bespeak choice; they aren't failed attempts at representation but refined emblems.
When your best shot at representation comes from the likes of Benefits Street and Britain's Hardest Grafter, the BBC's forthcoming show in which low-paid contestants compete at work tasks for cash prizes, it's time to worry.
We were simply looking at representation based on author affiliation with institutions in Asian countries.
Several American cities, recognizing this reality, provide both geographic and "at large" representation.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com