Exact(12)
Iterative searches and addition of new positives led to a progressively refined profile with repeats from Tetraodon nigroviridis, Takifugu rubripes, and chicken, which matched mammalian periostin sequences (including human) at E-value 1.8 (3rd iteration).
It's the 3rd iteration, but "iPhone 3" wouldn't make a lot of sense given that the 2nd iteration was the "iPhone 3G".
For 4th iteration again all use same candidate set approach due to less number of frequent items in 3rd iteration (Fig. 6b).
For example, a search with the sequence from Hyperthermus butylicus (Hbut_0467) used as the query retrieved the Rpb8 sequence from fission yeast Schizosaccharomyces pombe in the 2nd iteration, with a E-value of 0.004, and numerous eukaryotic Rpb8 sequences in the 3rd iteration, with highly significant E-values.
Figure 2 Outputs of linear system at the 3rd iteration.
Figure 6 Outputs of nonlinear system at the 3rd iteration.
Similar(48)
One VF2 iteration.
Step 3: Iteration.
Figure 1 Iteration errors.
Lemma 3.1 (Iteration lemma).
3i42s + 2i24s + 2i1s iteration scheme.
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Justyna Jupowicz-Kozak
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