Exact(20)
This microarray covers 541 miRNAs, each of which is covered by approximately 100 probes (60-mer) over its 12.5-kb genomic position, that includes predicted transcription start sites.
Intensities for ACC1 and ACC2 are the average of over 100 probes per gene.
Briefly, the probes were ordered based on their individual chromosome coordinates and sliding windows of 100 probes were analyzed.
To find out the dysregulated clusters between Spr and B6 we constructed sliding windows of 100 probes, which were moved along the chromosomal coordinates.
Briefly, PCR products were hybridized with probes bound to fluorescently coded micro-spheres (HLA-A: 58/61/63 probes, -B: 100 probes, -C: 56 probes, -DPB1: 40 probes, -DQB1: 37 probes and -DRB1: 70 probes).
Finally, let Y be the 100 probes that occur most frequently in the top 100 probes for these training sets.
Similar(40)
Figure 8a ~ d and e ~ h depict the hit rate of simulated PLR and RTT, respectively, using 0 probe, 2 probes, 4 probes, and 6 probes.
This resulted in 490 japonica eQTLs from 609 probes and 104 indica eQTLs from 118 probes.
The RMSE for the original PLS-3 signature with 909 probes (1.0 threshold) is approximately the same (between 0.45 and 0.46) as the 0.8 (2248 probes), 0.9 (1461 probes), 1.1 (547 probes), and 1.2 (323 probes) threshold signatures.
We identified 490 japonica eQTLs from 609 probes and 104 indica eQTLs from 118 probes (Additional file 5: Table S2).
The Mariner 2 and 4 probes in the early 1960s changed all that.
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