Among the 120 SoP samples, only 14 lack the IN move and 15 lack the CO move.
A total of 182 SoP samples were initially collected and then 100 of them were eventually used to compile the five corpora, with 20 SoP samples in each representing the five major academic disciplines.
The reads were analysed using Mothur (v1.38; Schloss et al. 2009) and the Mothur 454 SOP (Schloss et al. 2011).
First, these studies have included relative small data sets, with each study only handling 20 to 35 SoP samples from few disciplines.
I combined the coding schemes in previous research based on their commonalities and then test the modified coding scheme by coding the first 20 SoP samples in the collected data.
The adaptors and unique tag regions were trimmed by Mothur, following the 454 SOP (http://www.mothur.org/wiki/454_SOP) to get fasta-format files of each sample.
The revision of the overall TB/HIV framework [ 23] reflects the new 3Is SOP, which by 2013 will be implemented nationwide.
With roll-out of the 3Is SOP, 85.5% of coinfected individuals were confirmed as started on CPT and 78% on ART [ 24]; these numbers built upon a doubling and tripling from 2009 to 2010 due largely to improvements in reporting.
Polygalacturonase AO090023000161, a member of the GH family 28, was down-regulated in the presence of three oligosaccharides, viz., O-CHE, O-X3G4R, SOP, indicating possibly the different role of this isoenzyme compared to other pectin hydrolyzing enzymes.
One more xylan auxiliary GH-2 enzyme product of the gene AO090023000053 induced by O-CHE, O-X3G4R, SOP and O-MHE, possibly exhibit β-galactosidase or α-L-arabinofuranosidase B activity due to high homology with characterized members of both enzyme classes.
O-CHE (365 genes), SOP (323 genes), O-X3G4R (318 genes) and O-MHE (270 genes) samples showed the highest number of metabolic genes with statistically significant difference in relative expression as compared to the glucose sample.
