Sentence examples for * asdb from inspiring English sources

Inside of the AsdB branch, a non-functional AsdB branch composed of Edwardsiella and Yersinia AsdB sequences was identified (Fig. 3), indicating that these non-functional AsdB proteins may have a common origin.

Streptococcus mutans asdB region (including the full promoter), cloned into pYA575 [36] and S. mutans SD-asdB, cloned into pYA248 [18] complemented E. ictaluri ΔasdA01 mutants.

Thus, asdB can be considered a pseudo gene in E. ictaluri.

We found a particular group of non-functional AsdB genes in Edwardsiella and Yersinia.

Two E. ictaluri asd genes were identified, a functional asdA and a non-functional asdB pseudogene.

Complementation of E. ictaluri ΔasdA01 mutants by Gram-positive AsdB enzyme was also evaluated.

E. ictaluri ΔasdA01 mutants complemented with SD-asdB (pYA248), presented the lowest growth rate, suggesting that S. mutans AsdB is probably required in higher levels to fully complement E. ictaluri or S. mutans AsdB do not interact efficiently with E. ictaluri aspartokinase enzymes to transfer the β-aspartyl phosphate to Asd.

To determine which events are novel, the exons and spanning introns were compared against several annotation data sets (CCDS, UCSC Genes, Ensembl v.61, H-ASDB and dbEST ), allowing for a small difference (up to W=5 bp) at the endpoints.

Based on a comparison against several annotation databases (Ensembl, CCDS, UCSC Genes and H-ASDB ), we found that 11 45% of the assembled transcripts in each tissue were unannotated, as well as a majority (65%) of the 26,989 exon skipping events discovered from this data set.

ASDB participated in data analysis and interpretation of data and assisted in drafting the manuscript.

ASDB contributed to the study's conception and design, as well as to acquisition of data, data management, analysis and interpretation of data, and drafting and revising the final manuscript submitted for publication.